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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7344941_7349299_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7344941 - 7349299

Intron Length:

4359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGAACT

5'SS Class:

major

3'SS Sequence:

TCTCTCTGTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

AGTTTCTCATTT

Flanking Amino Acid:

SESDEDAALAAAARYEEGES

Intron Amino Acid Position:

362

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

70.8

39.2

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

80.7

0.69

0.9

76.3

32.2

Minor 5ss

34.9

-1.7

3.3

46.9

42.6

Minor BPS

0.14

1.8

71.05

40.2

Associated Gene:

Gene:

PBRM1

Ensembl Gene ID:

ENSAPLG00000005420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005740

7304726 - 7360576

55851