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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7349392_7350766_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7349392 - 7350766

Intron Length:

1375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TTTTCTTTTTTT

Flanking Amino Acid:

DERNSSNKYYRNKRSAQGDR

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.9

83.6

29.8

Major BPS

82.1

0.8

71.6

36.4

Major PPT

94.8

1.01

0.5

92.6

17.3

Minor 5ss

35.5

-1.6

2.7

43.1

43.9

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

PBRM1

Ensembl Gene ID:

ENSAPLG00000005420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005740

7304726 - 7360576

55851