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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7353596_7354021_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7353596 - 7354021

Intron Length:

426

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTAATTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTCTTTTAATT

Flanking Amino Acid:

YNEPGSQVFKDANAIKKIFN

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

25.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.3

0.61

73.3

40.8

Minor 5ss

42.5

-0.8

2.8

45.4

Minor BPS

72.8

0.79

1.1

83.14

31.5

Associated Gene:

Gene:

PBRM1

Ensembl Gene ID:

ENSAPLG00000005420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005740

7304726 - 7360576

55851