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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7354936_7355478_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7354936 - 7355478

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGGGTATT

5'SS Class:

major

3'SS Sequence:

CTTTGTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TTTGTAATAATA

Flanking Amino Acid:

ELFQKLPSKVQYPDYYAIIK

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

79.6

35.4

Major BPS

0.75

78.6

Major PPT

88.1

0.86

0.8

80.3

37.3

Minor 5ss

-1.7

3.2

47.2

42.9

Minor BPS

49.5

-0

1.9

68.86

37.7

Associated Gene:

Gene:

PBRM1

Ensembl Gene ID:

ENSAPLG00000005420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005740

7304726 - 7360576

55851