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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7359114_7359520_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7359114 - 7359520

Intron Length:

407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACCT

5'SS Class:

strong_major

3'SS Sequence:

GTCCTTGCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

ACTGCTTAGAAT

Flanking Amino Acid:

CELFIRAPKRRNQPDYYEVV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

78.1

36.3

Major BPS

0.72

78.4

31.2

Major PPT

66.8

0.38

61.6

38.9

Minor 5ss

34.6

-1.8

3.2

49.1

46.6

Minor BPS

46.1

-0.2

1.9

61.48

Associated Gene:

Gene:

PBRM1

Ensembl Gene ID:

ENSAPLG00000005420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005740

7304726 - 7360576

55851