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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7380111_7381208_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7380111 - 7381208

Intron Length:

1098

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTCTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

ATTTACACATCT

Flanking Amino Acid:

FMAGVALSCLLTLPPWPMYR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

80.5

34.9

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

77.5

0.62

82.6

26.5

Minor 5ss

-0.7

2.8

55.1

43.4

Minor BPS

46.3

-0.2

2.2

73.27

42.8

Associated Gene:

Gene:

SPCS1

Ensembl Gene ID:

ENSAPLG00000004976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005124

7379275 - 7381322

2048