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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7417641_7418937_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7417641 - 7418937

Intron Length:

1297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

TATTTCTTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

WLDSVTLQQEGLTLIINKEK

Intron Amino Acid Position:

360

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

73.4

43.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.4

0.82

0.7

84.9

29.4

Minor 5ss

36.2

-1.6

3.5

48.3

47.3

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033237

7414518 - 7421218

6701

ENSAPLT00000004404

7410062 - 7421003

10942