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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7419111_7420887_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7419111 - 7420887

Intron Length:

1777

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGACTT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTATTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTAAT

U12 Branch Point Sequence:

CATGTCTGAAAT

Flanking Amino Acid:

KLSEQTHGLLGQFFHPIDFT

Intron Amino Acid Position:

418

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

77.2

37.7

Major BPS

69.2

0.48

1.3

69.7

44.2

Major PPT

82.9

0.74

0.7

81.4

29.4

Minor 5ss

-0.7

3.1

65.1

46.1

Minor BPS

50.4

0.09

1.7

66.83

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033237

7414518 - 7421218

6701

ENSAPLT00000004404

7410062 - 7421003

10942