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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7440425_7441035_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7440425 - 7441035

Intron Length:

611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTACGTTGC

5'SS Class:

major

3'SS Sequence:

CTTTCCTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATGCAA

U12 Branch Point Sequence:

GCATGCAAAGCT

Flanking Amino Acid:

VSQGQSAGLVKITGRKLEQF

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

67.1

39.7

Major BPS

48.3

-0.1

1.3

37.9

Major PPT

81.1

0.7

73.3

31.6

Minor 5ss

41.2

-1

52.1

39.3

Minor BPS

38.5

-0.8

2.3

54.35

46.7

Associated Gene:

Gene:

ITIH4

Ensembl Gene ID:

ENSAPLG00000004101

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020078

7436269 - 7442085

5817

ENSAPLT00000004224

7432064 - 7445166

13103