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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7787193_7788119_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7787193 - 7788119

Intron Length:

927

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

GTTTTCGCAATT

Flanking Amino Acid:

VSGVITVFSEVFFCCDKGWM

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.11

0.7

88.7

23.8

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

81.1

0.7

0.8

80.2

31.9

Minor 5ss

37.2

-1.4

3.3

45.2

Minor BPS

0.11

2.2

76.39

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038945

7784652 - 7800925

16274

ENSAPLT00000003454

7784652 - 7800806

16155