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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7788370_7789642_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7788370 - 7789642

Intron Length:

1273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATACAT

U12 Branch Point Sequence:

ATAGTTCGAATT

Flanking Amino Acid:

FALMCKEEVDRYNFVMLALS

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.3

1.11

0.7

90.9

28.7

Major BPS

74.9

0.62

81.3

29.9

Major PPT

86.8

0.83

0.6

81.3

30.7

Minor 5ss

37.5

-1.4

2.8

51.6

44.9

Minor BPS

44.4

-0.3

1.7

60.09

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003454

7784652 - 7800806

16155

ENSAPLT00000038945

7784652 - 7800925

16274