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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7789749_7791504_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7789749 - 7791504

Intron Length:

1756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGGGG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TATCATTTAAAT

Flanking Amino Acid:

YGGSMLSSGTGPNLLRCYSL

Intron Amino Acid Position:

367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

61.1

43.7

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

-2.5

3.5

37.8

47.1

Minor BPS

60.8

0.42

1.6

77.42

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038945

7784652 - 7800925

16274

ENSAPLT00000003454

7784652 - 7800806

16155