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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7791650_7792823_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7791650 - 7792823

Intron Length:

1174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

ATCCATGTAAAT

Flanking Amino Acid:

RGKNVKDQKQDDIAMAANVL

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

81.2

33.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

100

1.12

0.4

100

Minor 5ss

48.8

-0.1

3.1

72.7

44.5

Minor BPS

43.7

-0.4

2.1

61.9

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038945

7784652 - 7800925

16274

ENSAPLT00000003454

7784652 - 7800806

16155