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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7792955_7795143_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7792955 - 7795143

Intron Length:

2189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

TTGTTTTTAAAG

Flanking Amino Acid:

FLNVLNFGDQGVYDIVNNLG

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

76.2

39.9

Major BPS

77.8

0.69

78.2

31.8

Major PPT

80.8

0.69

82.2

33.3

Minor 5ss

35.9

-1.6

3.3

40.9

45.3

Minor BPS

65.9

0.36

1.4

67.73

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038945

7784652 - 7800925

16274

ENSAPLT00000003454

7784652 - 7800806

16155