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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7795548_7796439_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7795548 - 7796439

Intron Length:

892

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAC

U12 Branch Point Sequence:

TTTTCAGTATTT

Flanking Amino Acid:

ALLPKVVEDETFLNWKEARL

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

73.2

39.3

Major BPS

74.8

0.62

1.1

40.5

Major PPT

89.6

0.89

0.7

84.2

30.9

Minor 5ss

39.2

-1.2

3.1

52.5

44.7

Minor BPS

49.3

0.03

2.4

80.9

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038945

7784652 - 7800925

16274

ENSAPLT00000003454

7784652 - 7800806

16155