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Intron Name: Anas_platyrhynchos_platyrhynchos_13_78787_80195_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78787 - 80195

Intron Length:

1409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGTTG

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

AATAACTTAATT

Flanking Amino Acid:

ITQFKERDLKEILTLKEVFQ

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

41.4

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

88.5

0.87

0.7

84.9

29.9

Minor 5ss

46.5

-0.4

3.1

64.1

47.4

Minor BPS

65.8

0.57

1.5

77.94

37.8

Associated Gene:

Gene:

APPL1

Ensembl Gene ID:

ENSAPLG00000004500

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004671

64512 - 85564

21053