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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7920337_7921065_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7920337 - 7921065

Intron Length:

729

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGCCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

TTTGGGTGAAGT

Flanking Amino Acid:

GTAANSRDTMFQKERFNIDM

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.8

0.9

74.3

34.1

Major BPS

52.1

0.05

1.3

41.8

Major PPT

70.9

0.47

0.8

64.1

31.3

Minor 5ss

33.2

-1.9

3.4

45.7

43.4

Minor BPS

41.4

-0.5

2.6

68.08

48.5

Associated Gene:

Gene:

PRKCD

Ensembl Gene ID:

ENSAPLG00000002693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002775

7905163 - 7932756

27594