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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7921196_7921847_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7921196 - 7921847

Intron Length:

652

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGAGG

5'SS Class:

strong_major

3'SS Sequence:

ACATTTCTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

TTTTCCTGATCC

Flanking Amino Acid:

GLVKQGLKCEECGMNVHHKC

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

66.1

45.1

Major BPS

78.8

0.71

67.6

40.6

Major PPT

76.4

0.6

0.8

74.2

35.7

Minor 5ss

37.8

-1.4

3.1

48.3

47.5

Minor BPS

70.6

0.63

1.7

83.6

35.6

Associated Gene:

Gene:

PRKCD

Ensembl Gene ID:

ENSAPLG00000002693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002775

7905163 - 7932756

27594