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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7924783_7925509_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7924783 - 7925509

Intron Length:

727

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

CATGCTGTAATC

Flanking Amino Acid:

KVLGKGSFGKVLLAELKGKN

Intron Amino Acid Position:

375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

83.1

28.6

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

94.8

1.01

0.5

92.6

17.3

Minor 5ss

42.1

-0.9

2.5

53.5

43.9

Minor BPS

47.9

-0.1

2.1

58.37

41.6

Associated Gene:

Gene:

PRKCD

Ensembl Gene ID:

ENSAPLG00000002693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002775

7905163 - 7932756

27594