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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7925684_7926251_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7925684 - 7926251

Intron Length:

568

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

TATTTGCAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTATTTGCAAAC

Flanking Amino Acid:

THLYCTFQTKDHLFFVMEFL

Intron Amino Acid Position:

433

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.1

38.2

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

68.2

0.41

1.1

63.3

41.8

Minor 5ss

28.6

-2.5

3.5

46.8

Minor BPS

44.7

-0.4

2.1

60.07

39.1

Associated Gene:

Gene:

PRKCD

Ensembl Gene ID:

ENSAPLG00000002693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002775

7905163 - 7932756

27594