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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7928995_7929950_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7928995 - 7929950

Intron Length:

956

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTCTC

5'SS Class:

major

3'SS Sequence:

ATACCTTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTTTTTTAATA

Flanking Amino Acid:

IVTDPEGSGFGDLKLDNVML

Intron Amino Acid Position:

499

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

67.1

44.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.4

0.66

0.9

73.4

36.2

Minor 5ss

36.9

-1.5

3.3

44.4

43.5

Minor BPS

0.81

1.1

33.3

Associated Gene:

Gene:

PRKCD

Ensembl Gene ID:

ENSAPLG00000002693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002775

7905163 - 7932756

27594