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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7951128_7951754_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
7951128 - 7951754

Intron Length:
627

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCA|GTAAGTCCA

5'SS Class:
major

3'SS Sequence:
TTTGTATTATTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTGTATTACCT

Flanking Amino Acid:
QWKVLNEIDAGVCEEMTYEE

Intron Amino Acid Position:
309

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.9
0.59
1.1
65.7
40.1

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
75.5
0.57
0.9
75.5
38.5

Minor 5ss
36.7
-1.5
2.9
48.4
41.1

Minor BPS
55.6
0.25
2
80.31
41.8

Associated Gene:

Gene:
PFKFB4

Ensembl Gene ID:

Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7942271 - 7969484
27214

7942271 - 7966191
23921