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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7954857_7955759_R


Intron Information:

Intron Rank:
5

Intron Class:
major-like

Intron Phase:
0

Intron Coordinates:
7954857 - 7955759

Intron Length:
903

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAGTCAA

5'SS Class:
strong_major

3'SS Sequence:
GTTCGGGCTGAAG|A

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
TGTACAT

U12 Branch Point Sequence:
TCTTTCTGTACA

Flanking Amino Acid:
YKFGEENGYKTFFVESVCVD

Intron Amino Acid Position:
131

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
90.8
0.96
0.8
79.3
31.1

Major BPS
67.6
0.44
1.2
75
40

Major PPT
54.9
0.11
1.2
52.5
41.9

Minor 5ss
28.1
-2.5
2.7
31.6
42.6

Minor BPS
58.1
0.25
1.8
71.49
40.4

Associated Gene:

Gene:
PFKFB4

Ensembl Gene ID:

Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7942271 - 7969484
27214

7942271 - 7966191
23921