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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7962669_7966157_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
7962669 - 7966157

Intron Length:
3489

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GTT|GTAATTTTA

5'SS Class:
major

3'SS Sequence:
TTTTCTGTTTCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AAATAAC

U12 Branch Point Sequence:
TGGTAAATAACT

Flanking Amino Acid:
SVYNIRRKGSLCMTNCPTLI

Intron Amino Acid Position:
12

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.1
0.43
1.1
71.6
33.9

Major BPS
61.3
0.28
1
62
30.6

Major PPT
89.9
0.9
0.7
88.4
28.7

Minor 5ss
46.4
-0.4
2.8
64.2
41.4

Minor BPS
48.9
-0
2.1
72.54
43.3

Associated Gene:

Gene:
PFKFB4

Ensembl Gene ID:

Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7942271 - 7966191
23921