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Intron Name: Anas_platyrhynchos_platyrhynchos_13_8333768_8335841_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8333768 - 8335841

Intron Length:

2074

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTTTCTGTCCT

Flanking Amino Acid:

ALSLLCKLPQSRVIAVDKEE

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

83.9

30.3

Major BPS

84.4

0.85

1.1

34.5

Major PPT

79.5

0.66

0.8

73.3

37.1

Minor 5ss

44.3

-0.6

3.1

64.1

47.4

Minor BPS

42.7

-0.4

3.6

80.3

41.5

Associated Gene:

Gene:

HEMK1

Ensembl Gene ID:

ENSAPLG00000007163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007433

8314885 - 8345152

30268