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Intron Name: Anas_platyrhynchos_platyrhynchos_13_8339345_8340735_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8339345 - 8340735

Intron Length:

1391

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATTCTT

5'SS Class:

major

3'SS Sequence:

TTTTCTTTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

ATGGTTGTGATT

Flanking Amino Acid:

IHILHHNVSYGSAKQLLLWG

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

76.4

38.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

86.4

0.82

0.6

Minor 5ss

40.4

-1.1

3.1

56.3

42.2

Minor BPS

43.8

-0.4

59.08

39.6

Associated Gene:

Gene:

HEMK1

Ensembl Gene ID:

ENSAPLG00000007163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007433

8314885 - 8345152

30268