Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_8411805_8416247_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8411805 - 8416247

Intron Length:

4443

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGACAC

5'SS Class:

strong_major

3'SS Sequence:

CCCTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

CAAGGAAAAACA

Flanking Amino Acid:

MILCVQGPHPLLAEEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

40.1

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

81.5

0.71

0.8

79.3

32.7

Minor 5ss

31.8

-2.1

3.1

34.5

41.3

Minor BPS

33.4

-1.2

2.1

39.16

39.8

Associated Gene:

Gene:

CISH

Ensembl Gene ID:

ENSAPLG00000016328

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017036

8410582 - 8416267

5686