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Intron Name: Anas_platyrhynchos_platyrhynchos_13_8459698_8461794_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8459698 - 8461794

Intron Length:

2097

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAAAAAT

5'SS Class:

strong_major

3'SS Sequence:

ATTGTATTTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTTCTCTAAAAT

Flanking Amino Acid:

ERGDQAFTEREASEIMRDIG

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

0.9

79.2

28.8

Major BPS

84.4

0.85

34.5

Major PPT

76.5

0.6

0.9

70.2

39.9

Minor 5ss

-2.4

39.4

46.1

Minor BPS

0.45

1.8

82.38

38.6

Associated Gene:

Gene:

MAPKAPK3

Ensembl Gene ID:

ENSAPLG00000016332

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038489

8424502 - 8472708

48207

ENSAPLT00000033285

8366903 - 8472708

105806

ENSAPLT00000017050

8424898 - 8472708

47811