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Intron Name: Anas_platyrhynchos_platyrhynchos_13_8461875_8464019_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8461875 - 8464019

Intron Length:

2145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

TGTGGTCTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

CTCTGCTTATCC

Flanking Amino Acid:

SMNIAHRDVKPENLLYTSKE

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

72.1

39.1

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

77.8

0.63

0.9

73.5

41.8

Minor 5ss

27.9

-2.5

3.2

39.3

46.1

Minor BPS

52.8

0.07

2.1

65.52

46.3

Associated Gene:

Gene:

MAPKAPK3

Ensembl Gene ID:

ENSAPLG00000016332

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038489

8424502 - 8472708

48207

ENSAPLT00000033285

8366903 - 8472708

105806

ENSAPLT00000017050

8424898 - 8472708

47811