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Intron Name: Anas_platyrhynchos_platyrhynchos_13_8464147_8465654_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8464147 - 8465654

Intron Length:

1508

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TCTCTGTTAATT

Flanking Amino Acid:

QTPCYTPYYVAPEVLGPEKY

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

80.1

30.7

Major BPS

84.4

0.85

34.5

Major PPT

90.1

0.9

0.6

88.5

20.9

Minor 5ss

-1.6

2.9

40.8

45.4

Minor BPS

57.1

0.3

2.1

76.4

40.9

Associated Gene:

Gene:

MAPKAPK3

Ensembl Gene ID:

ENSAPLG00000016332

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038489

8424502 - 8472708

48207

ENSAPLT00000033285

8366903 - 8472708

105806

ENSAPLT00000017050

8424898 - 8472708

47811