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Intron Name: Anas_platyrhynchos_platyrhynchos_13_8468205_8470954_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8468205 - 8470954

Intron Length:

2750

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTTTC

5'SS Class:

major

3'SS Sequence:

TCCCTTTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TTTTCAGAACAC

Flanking Amino Acid:

SQFMNHPWINRSMAVPPTPL

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.2

78.3

32.5

Major BPS

0.65

1.5

85.7

34.9

Major PPT

0.77

0.7

83.1

25.3

Minor 5ss

40.7

-1

2.9

51.8

38.6

Minor BPS

39.4

-0.8

2.6

60.42

44.6

Associated Gene:

Gene:

MAPKAPK3

Ensembl Gene ID:

ENSAPLG00000016332

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017050

8424898 - 8472708

47811

ENSAPLT00000038489

8424502 - 8472708

48207

ENSAPLT00000033285

8366903 - 8472708

105806