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Intron Name: Anas_platyrhynchos_platyrhynchos_13_8471036_8472549_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8471036 - 8472549

Intron Length:

1514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

GCTTGGTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TGTTCAATAAAT

Flanking Amino Acid:

EDKDHWDEVKEEMTSALATM

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

33.2

Major BPS

0.82

0.8

24.9

Major PPT

75.2

0.57

64.9

45.7

Minor 5ss

29.8

-2.3

2.8

32.3

35.9

Minor BPS

56.6

0.29

81.06

39.4

Associated Gene:

Gene:

MAPKAPK3

Ensembl Gene ID:

ENSAPLG00000016332

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038489

8424502 - 8472708

48207

ENSAPLT00000033285

8366903 - 8472708

105806

ENSAPLT00000017050

8424898 - 8472708

47811