Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_8658912_8664256_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8658912 - 8664256

Intron Length:

5345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTCTTTTTAATC

Flanking Amino Acid:

VLYADGEILKDCISLGSGEP

Intron Amino Acid Position:

379

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

25.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.5

0.84

0.8

80.2

37.3

Minor 5ss

35.3

-1.7

3.2

50.4

Minor BPS

0.58

1.2

69.9

36.2

Associated Gene:

Gene:

DOCK3

Ensembl Gene ID:

ENSAPLG00000002255

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002356

8536078 - 8692775

156698