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Intron Name: Anas_platyrhynchos_platyrhynchos_13_8773350_8774803_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8773350 - 8774803

Intron Length:

1454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TTTAATCTAAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTTTTTAATC

Flanking Amino Acid:

VIGTKGDIAHIYDIQTGNKL

Intron Amino Acid Position:

1198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

77.9

30.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

63.9

0.31

1.1

Minor 5ss

43.9

-0.7

2.7

58.7

38.8

Minor BPS

74.9

0.76

1.1

33.7

Associated Gene:

Gene:

DCAF1

Ensembl Gene ID:

ENSAPLG00000015002

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015689

8769972 - 8800262

30291

ENSAPLT00000015684

8765944 - 8800262

34319