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Intron Name: Anas_platyrhynchos_platyrhynchos_13_8778684_8779610_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8778684 - 8779610

Intron Length:

927

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTTCCCTCACTA

Flanking Amino Acid:

DEAGSTVSTVGISIILGVAE

Intron Amino Acid Position:

655

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

38.1

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

73.4

0.53

0.8

67.6

33.7

Minor 5ss

39.1

-1.2

2.8

40.9

45.4

Minor BPS

57.5

0.23

1.8

73.19

38.8

Associated Gene:

Gene:

DCAF1

Ensembl Gene ID:

ENSAPLG00000015002

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015689

8769972 - 8800262

30291

ENSAPLT00000015684

8765944 - 8800262

34319