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Intron Name: Anas_platyrhynchos_platyrhynchos_13_8781693_8782552_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8781693 - 8782552

Intron Length:

860

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATGCTTCCAACT

Flanking Amino Acid:

ILVHPQPPYKACSYTHEQIV

Intron Amino Acid Position:

557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

72.2

39.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

78.9

0.65

0.9

76.1

32.4

Minor 5ss

34.3

-1.8

2.9

44.2

Minor BPS

46.3

-0.2

1.8

64.44

39.9

Associated Gene:

Gene:

DCAF1

Ensembl Gene ID:

ENSAPLG00000015002

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015689

8769972 - 8800262

30291

ENSAPLT00000015684

8765944 - 8800262

34319