Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_8790157_8791011_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8790157 - 8791011

Intron Length:

855

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAATGATA

5'SS Class:

major

3'SS Sequence:

TTTTGTGAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

CTTTTGTGAAAC

Flanking Amino Acid:

ANYRDENSQLVALVLRRLRE

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

73.3

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

70.3

0.46

1.1

66.4

43.3

Minor 5ss

36.1

-1.6

3.3

45.5

43.8

Minor BPS

47.4

-0.2

2.2

63.83

41.7

Associated Gene:

Gene:

DCAF1

Ensembl Gene ID:

ENSAPLG00000015002

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015684

8765944 - 8800262

34319

ENSAPLT00000015689

8769972 - 8800262

30291