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Intron Name: Anas_platyrhynchos_platyrhynchos_13_8914646_8915236_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
8914646 - 8915236

Intron Length:
591

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAACAGGG

5'SS Class:
major

3'SS Sequence:
TTGCTCCTGGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CAATAAC

U12 Branch Point Sequence:
CCTTCCACAATA

Flanking Amino Acid:
GLARLAYPAQVVSLILSDVI

Intron Amino Acid Position:
206

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.8
0.58
1.2
60.8
44.4

Major BPS
57.8
0.19
1.1
59.6
32.6

Major PPT
69
0.43
1
66.3
35.7

Minor 5ss
35.4
-1.7
3.4
47.6
47.9

Minor BPS
51.9
0.05
1.9
64.29
42.5

Associated Gene:

Gene:
GLYCTK

Ensembl Gene ID:

Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8912740 - 8921261
8522