Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_8917069_8917420_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8917069 - 8917420

Intron Length:

352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGGGAG

5'SS Class:

major

3'SS Sequence:

CTTACCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAC

U12 Branch Point Sequence:

CCTTCCTTACCC

Flanking Amino Acid:

IQESLQRAGMQEMLLKPHSR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

41.2

Major BPS

68.9

0.47

59.6

38.6

Major PPT

76.4

0.59

0.8

66.4

35.6

Minor 5ss

30.8

-2.2

3.6

42.9

45.3

Minor BPS

68.8

0.57

1.7

73.88

43.5

Associated Gene:

Gene:

GLYCTK

Ensembl Gene ID:

ENSAPLG00000026434

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033843

8912740 - 8921261

8522