Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_8946206_8946466_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8946206 - 8946466

Intron Length:

261

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAACA

5'SS Class:

major

3'SS Sequence:

TTTGTACACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAC

U12 Branch Point Sequence:

CAGACCGAAACT

Flanking Amino Acid:

FLAENRTDPHRFSELAKCLV

Intron Amino Acid Position:

391

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

74.4

Major BPS

68.4

0.46

0.9

69.3

26.9

Major PPT

72.4

0.5

66.4

38.9

Minor 5ss

39.3

-1.2

2.8

50.5

45.5

Minor BPS

44.7

-0.3

2.3

61.37

Associated Gene:

Gene:

PPM1M

Ensembl Gene ID:

ENSAPLG00000010830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011303

8946058 - 8952419

6362