Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_8991750_8992212_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8991750 - 8992212

Intron Length:

463

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

GGGCCCTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

TGCTCAGTAACA

Flanking Amino Acid:

SRHPRVCGAVMDTLKQHGAG

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

79.9

34.9

Major BPS

54.4

0.11

1.2

36.4

Major PPT

65.3

0.34

0.9

58.1

38.4

Minor 5ss

34.4

-1.8

2.9

41.7

Minor BPS

51.5

0.04

2.3

69.26

42.8

Associated Gene:

Gene:

ALAS1

Ensembl Gene ID:

ENSAPLG00000009917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010328

8987579 - 8994620

7042