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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9038675_9040333_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9038675 - 9040333

Intron Length:

1659

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAAAATT

5'SS Class:

major

3'SS Sequence:

ATCGGATATAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

DGARWDRTKSKSNAYVCPLY

Intron Amino Acid Position:

643

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.1

37.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

51.5

0.03

1.2

49.2

Minor 5ss

-1

3.3

63.7

41.6

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009244

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035517

9038504 - 9049743

11240