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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9044880_9046768_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9044880 - 9046768

Intron Length:

1889

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATTTTC

5'SS Class:

major

3'SS Sequence:

GAAGGTATGGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TTTTCTTGAAGG

Flanking Amino Acid:

FFSGCPEKELKLLFGVCFFH

Intron Amino Acid Position:

705

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

76.8

32.6

Major BPS

84.6

0.86

41.2

Major PPT

41.7

-0.4

1.7

36.1

44.3

Minor 5ss

-0.5

2.8

58.6

40.4

Minor BPS

62.7

0.26

1.8

71.98

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009244

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035517

9038504 - 9049743

11240

ENSAPLT00000021388

9038504 - 9049123

10620

ENSAPLT00000009680

9042488 - 9056274

13787