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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9048200_9049054_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9048200 - 9049054

Intron Length:

855

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATGA

5'SS Class:

strong_major

3'SS Sequence:

TTTACTTCACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

TTTGATTTAAGT

Flanking Amino Acid:

VILRCLRPDKIGPAITTFVT

Intron Amino Acid Position:

523

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

71.1

35.5

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

77.4

0.62

0.9

39.5

Minor 5ss

36.7

-1.5

3.1

47.8

47.6

Minor BPS

58.9

0.36

1.9

80.33

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009244

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009680

9042488 - 9056274

13787

ENSAPLT00000035517

9038504 - 9049743

11240

ENSAPLT00000021388

9038504 - 9049123

10620