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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9049712_9050595_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9049712 - 9050595

Intron Length:

884

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGCTCA

5'SS Class:

major

3'SS Sequence:

GCTTGGAATATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGGAAT

U12 Branch Point Sequence:

CCTGCTTGGAAT

Flanking Amino Acid:

FSFLLCCNLLMAKNEIERQE

Intron Amino Acid Position:

425

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

70.6

36.1

Major BPS

59.5

0.24

1.5

69.7

44.2

Major PPT

58.8

0.2

Minor 5ss

46.6

-0.4

2.8

61.5

43.1

Minor BPS

46.4

-0.2

1.7

60.05

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009244

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009680

9042488 - 9056274

13787