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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9055574_9056055_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
9055574 - 9056055

Intron Length:
482

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTAGAACA

5'SS Class:
major

3'SS Sequence:
TTTCTTGCAGAAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTCTAT

U12 Branch Point Sequence:
TTTTTTCTATTT

Flanking Amino Acid:
CTKDWSKLCKKNIPCSDTFS

Intron Amino Acid Position:
74

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.8
0.7
1.1
75.5
33.7

Major BPS
73.8
0.59
1.3
72.8
43

Major PPT
65.9
0.36
1.1
69
36.1

Minor 5ss
30.1
-2.3
2.6
33.6
41.1

Minor BPS
54.8
0.23
1.9
79.65
37.1

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9042488 - 9056274
13787