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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9113436_9114300_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
9113436 - 9114300

Intron Length:
865

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACT|GTAAGTGCT

5'SS Class:
major

3'SS Sequence:
TCTGTGTTAACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCAAAC

U12 Branch Point Sequence:
TCTGTGTTAACA

Flanking Amino Acid:
LGLQSLRSRTWYVQATCATQ

Intron Amino Acid Position:
153

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.3
0.6
1.1
72.2
37.5

Major BPS
67.4
0.43
1
73.2
28.9

Major PPT
74
0.54
1
69
40.8

Minor 5ss
38.2
-1.3
3.4
60.6
43.7

Minor BPS
55.6
0.17
2.2
70.02
42.9

Associated Gene:

Gene:
ARF4

Ensembl Gene ID:

Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9113044 - 9122028
8985