Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_9137778_9138446_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9137778 - 9138446

Intron Length:

669

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGATT

5'SS Class:

major

3'SS Sequence:

TGATGTCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

GATGACTAAAAA

Flanking Amino Acid:

TTQIVQNMHQANAQISMALP

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

75.8

39.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

73.4

0.53

0.9

70.3

Minor 5ss

36.2

-1.6

3.7

56.4

Minor BPS

45.5

-0.3

55.79

42.5

Associated Gene:

Gene:

DENND6A

Ensembl Gene ID:

ENSAPLG00000016704

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046204

9125357 - 9150245

24889