Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_919834_955681_R

Intron Information:

Intron Rank:

148226

Intron Class:

major

Intron Phase:

Intron Coordinates:

919834 - 955681

Intron Length:

35848

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTTAA

5'SS Class:

strong_major

3'SS Sequence:

CTATTGTCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATATTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

82.1

25.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.5

0.55

0.9

68.4

37.2

Minor 5ss

39.6

-1.2

2.8

49.5

46.6

Minor BPS

60.2

0.4

1.5

74.31

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045203

917976 - 955788

37813