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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9201531_9202375_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9201531 - 9202375

Intron Length:

845

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTACATACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TATATTTTACCT

Flanking Amino Acid:

MGNQLQACSKNQTEDSIRKE

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

89.8

22.2

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

76.8

0.6

70.5

39.5

Minor 5ss

39.1

-1.2

2.8

51.7

39.1

Minor BPS

60.4

0.4

1.6

77.15

39.5

Associated Gene:

Gene:

SLMAP

Ensembl Gene ID:

ENSAPLG00000008635

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027094

9158835 - 9239829

80995

ENSAPLT00000026756

9158835 - 9238718

79884

ENSAPLT00000017347

9158835 - 9239829

80995

ENSAPLT00000009071

9158835 - 9239829

80995

ENSAPLT00000028758

9158835 - 9239829

80995